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Occurrence and Diversity of Black-Foot Disease Fungi in Symptomless Grapevine Nursery Stock in Spain.

Identifieur interne : 000035 ( Main/Exploration ); précédent : 000034; suivant : 000036

Occurrence and Diversity of Black-Foot Disease Fungi in Symptomless Grapevine Nursery Stock in Spain.

Auteurs : Carmen Berlanas [Espagne] ; Sonia Ojeda [Espagne] ; Beatriz L Pez-Manzanares [Espagne] ; Marcos Andrés-Sodupe [Espagne] ; Rebeca Bujanda [Espagne] ; María Del Pilar Martínez-Diz [Espagne] ; Emilia Díaz-Losada [Espagne] ; David Gramaje [Espagne]

Source :

RBID : pubmed:31738690

Descripteurs français

English descriptors

Abstract

In this study, 3,426 grafted grapevines ready to be planted from 15 grapevine nursery fields in Northern Spain were inspected from 2016 to 2018 for black-foot causing pathogens. In all, 1,427 isolates of black-foot pathogens were collected from the asymptomatic inner tissues of surface sterilized secondary roots and characterized based on morphological features and DNA sequence data of the nuclear ribosomal DNA-internal transcribed spacer region, histone H3, translation elongation factor 1-alpha and β-tubulin genes. Eleven species belonging to the genera Dactylonectria, Ilyonectria, Neonectria, and Thelonectria were identified, including Dactylonectria alcacerensis, D. macrodidyma, D. novozelandica, D. pauciseptata, D. torresensis, Ilyonectria liriodendri, I. pseudodestructans, I. robusta, Neonectria quercicola, Neonectria sp. 1, and Thelonectria olida. In addition, two species are newly described, namely D. riojana and I. vivaria. Twenty-four isolates representing 13 black-foot species were inoculated onto grapevine seedlings cultivar 'Tempranillo'. The pathogenicity tests detected diversity in virulence among fungal species and between isolates within each species. The most virulent species was D. novozelandica isolate BV-0760, followed by D. alcacerensis isolate BV-1240 and I. vivaria sp. nov. isolate BV-2305. This study improves our knowledge on the etiology and virulence of black-foot disease pathogens, and opens up new perspectives in the study of the endophytic phase of these pathogens in grapevines.

DOI: 10.1094/PDIS-03-19-0484-RE
PubMed: 31738690


Affiliations:


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<term>Genetic Variation (MeSH)</term>
<term>Hypocreales (classification)</term>
<term>Hypocreales (cytology)</term>
<term>Hypocreales (genetics)</term>
<term>Plant Diseases (microbiology)</term>
<term>Plant Diseases (statistics & numerical data)</term>
<term>Spain (MeSH)</term>
<term>Species Specificity (MeSH)</term>
<term>Virulence (MeSH)</term>
<term>Vitis (microbiology)</term>
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<term>Espagne (MeSH)</term>
<term>Gènes fongiques (génétique)</term>
<term>Hypocreales (classification)</term>
<term>Hypocreales (cytologie)</term>
<term>Hypocreales (génétique)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Maladies des plantes (statistiques et données numériques)</term>
<term>Spécificité d'espèce (MeSH)</term>
<term>Variation génétique (MeSH)</term>
<term>Virulence (MeSH)</term>
<term>Vitis (microbiologie)</term>
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<term>Hypocreales</term>
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<term>Hypocreales</term>
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<term>Hypocreales</term>
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<term>Genes, Fungal</term>
<term>Hypocreales</term>
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<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Gènes fongiques</term>
<term>Hypocreales</term>
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<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr">
<term>Maladies des plantes</term>
<term>Vitis</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en">
<term>Plant Diseases</term>
<term>Vitis</term>
</keywords>
<keywords scheme="MESH" qualifier="statistics & numerical data" xml:lang="en">
<term>Plant Diseases</term>
</keywords>
<keywords scheme="MESH" qualifier="statistiques et données numériques" xml:lang="fr">
<term>Maladies des plantes</term>
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<keywords scheme="MESH" xml:lang="en">
<term>Genetic Variation</term>
<term>Species Specificity</term>
<term>Virulence</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Espagne</term>
<term>Hypocreales</term>
<term>Spécificité d'espèce</term>
<term>Variation génétique</term>
<term>Virulence</term>
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<div type="abstract" xml:lang="en">In this study, 3,426 grafted grapevines ready to be planted from 15 grapevine nursery fields in Northern Spain were inspected from 2016 to 2018 for black-foot causing pathogens. In all, 1,427 isolates of black-foot pathogens were collected from the asymptomatic inner tissues of surface sterilized secondary roots and characterized based on morphological features and DNA sequence data of the nuclear ribosomal DNA-internal transcribed spacer region, histone H3, translation elongation factor 1-alpha and β-tubulin genes. Eleven species belonging to the genera
<i>Dactylonectria</i>
,
<i>Ilyonectria</i>
,
<i>Neonectria</i>
, and
<i>Thelonectria</i>
were identified, including
<i>Dactylonectria alcacerensis</i>
,
<i>D. macrodidyma</i>
,
<i>D. novozelandica</i>
,
<i>D. pauciseptata</i>
,
<i>D. torresensis</i>
,
<i>Ilyonectria liriodendri</i>
,
<i>I. pseudodestructans</i>
,
<i>I. robusta</i>
,
<i>Neonectria quercicola</i>
,
<i>Neonectria</i>
sp. 1, and
<i>Thelonectria olida</i>
. In addition, two species are newly described, namely
<i>D. riojana</i>
and
<i>I. vivaria</i>
. Twenty-four isolates representing 13 black-foot species were inoculated onto grapevine seedlings cultivar 'Tempranillo'. The pathogenicity tests detected diversity in virulence among fungal species and between isolates within each species. The most virulent species was
<i>D. novozelandica</i>
isolate BV-0760, followed by
<i>D. alcacerensis</i>
isolate BV-1240 and
<i>I. vivaria</i>
sp. nov. isolate BV-2305. This study improves our knowledge on the etiology and virulence of black-foot disease pathogens, and opens up new perspectives in the study of the endophytic phase of these pathogens in grapevines.</div>
</front>
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<Day>28</Day>
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<Year>2020</Year>
<Month>01</Month>
<Day>28</Day>
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<Month>Jan</Month>
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<Title>Plant disease</Title>
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<ArticleTitle>Occurrence and Diversity of Black-Foot Disease Fungi in Symptomless Grapevine Nursery Stock in Spain.</ArticleTitle>
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<Abstract>
<AbstractText>In this study, 3,426 grafted grapevines ready to be planted from 15 grapevine nursery fields in Northern Spain were inspected from 2016 to 2018 for black-foot causing pathogens. In all, 1,427 isolates of black-foot pathogens were collected from the asymptomatic inner tissues of surface sterilized secondary roots and characterized based on morphological features and DNA sequence data of the nuclear ribosomal DNA-internal transcribed spacer region, histone H3, translation elongation factor 1-alpha and β-tubulin genes. Eleven species belonging to the genera
<i>Dactylonectria</i>
,
<i>Ilyonectria</i>
,
<i>Neonectria</i>
, and
<i>Thelonectria</i>
were identified, including
<i>Dactylonectria alcacerensis</i>
,
<i>D. macrodidyma</i>
,
<i>D. novozelandica</i>
,
<i>D. pauciseptata</i>
,
<i>D. torresensis</i>
,
<i>Ilyonectria liriodendri</i>
,
<i>I. pseudodestructans</i>
,
<i>I. robusta</i>
,
<i>Neonectria quercicola</i>
,
<i>Neonectria</i>
sp. 1, and
<i>Thelonectria olida</i>
. In addition, two species are newly described, namely
<i>D. riojana</i>
and
<i>I. vivaria</i>
. Twenty-four isolates representing 13 black-foot species were inoculated onto grapevine seedlings cultivar 'Tempranillo'. The pathogenicity tests detected diversity in virulence among fungal species and between isolates within each species. The most virulent species was
<i>D. novozelandica</i>
isolate BV-0760, followed by
<i>D. alcacerensis</i>
isolate BV-1240 and
<i>I. vivaria</i>
sp. nov. isolate BV-2305. This study improves our knowledge on the etiology and virulence of black-foot disease pathogens, and opens up new perspectives in the study of the endophytic phase of these pathogens in grapevines.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Berlanas</LastName>
<ForeName>Carmen</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas - Universidad de la Rioja - Gobierno de La Rioja, Ctra. de Burgos Km. 6, 26007 Logroño, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Ojeda</LastName>
<ForeName>Sonia</ForeName>
<Initials>S</Initials>
<AffiliationInfo>
<Affiliation>Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas - Universidad de la Rioja - Gobierno de La Rioja, Ctra. de Burgos Km. 6, 26007 Logroño, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>López-Manzanares</LastName>
<ForeName>Beatriz</ForeName>
<Initials>B</Initials>
<AffiliationInfo>
<Affiliation>Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas - Universidad de la Rioja - Gobierno de La Rioja, Ctra. de Burgos Km. 6, 26007 Logroño, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Andrés-Sodupe</LastName>
<ForeName>Marcos</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas - Universidad de la Rioja - Gobierno de La Rioja, Ctra. de Burgos Km. 6, 26007 Logroño, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Bujanda</LastName>
<ForeName>Rebeca</ForeName>
<Initials>R</Initials>
<AffiliationInfo>
<Affiliation>Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas - Universidad de la Rioja - Gobierno de La Rioja, Ctra. de Burgos Km. 6, 26007 Logroño, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Del Pilar Martínez-Diz</LastName>
<ForeName>María</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Estación de Viticultura y Enología de Galicia (AGACAL-EVEGA), Ponte San Clodio s/n 32428-Leiro-Ourense, Spain.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Universidade da Coruña, Facultade de Ciencias, Zapateira, 15071 A Coruña, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Díaz-Losada</LastName>
<ForeName>Emilia</ForeName>
<Initials>E</Initials>
<AffiliationInfo>
<Affiliation>Estación de Viticultura y Enología de Galicia (AGACAL-EVEGA), Ponte San Clodio s/n 32428-Leiro-Ourense, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Gramaje</LastName>
<ForeName>David</ForeName>
<Initials>D</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0003-1755-3413</Identifier>
<AffiliationInfo>
<Affiliation>Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas - Universidad de la Rioja - Gobierno de La Rioja, Ctra. de Burgos Km. 6, 26007 Logroño, Spain.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2019</Year>
<Month>11</Month>
<Day>18</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Plant Dis</MedlineTA>
<NlmUniqueID>9882809</NlmUniqueID>
<ISSNLinking>0191-2917</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D005800" MajorTopicYN="N">Genes, Fungal</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D014644" MajorTopicYN="Y">Genetic Variation</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D006999" MajorTopicYN="Y">Hypocreales</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010935" MajorTopicYN="Y">Plant Diseases</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
<QualifierName UI="Q000706" MajorTopicYN="N">statistics & numerical data</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D013030" MajorTopicYN="N" Type="Geographic">Spain</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D014774" MajorTopicYN="N">Virulence</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D027843" MajorTopicYN="Y">Vitis</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">Cylindrocarpon-like fungi</Keyword>
<Keyword MajorTopicYN="N">Nectriaceae</Keyword>
<Keyword MajorTopicYN="N">Vitis vinifera</Keyword>
<Keyword MajorTopicYN="N">endophyte</Keyword>
<Keyword MajorTopicYN="N">etiology</Keyword>
<Keyword MajorTopicYN="N">pathogen diversity</Keyword>
<Keyword MajorTopicYN="N">systematics</Keyword>
<Keyword MajorTopicYN="N">tree fruits</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="pubmed">
<Year>2019</Year>
<Month>11</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2020</Year>
<Month>1</Month>
<Day>29</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2019</Year>
<Month>11</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">31738690</ArticleId>
<ArticleId IdType="doi">10.1094/PDIS-03-19-0484-RE</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>Espagne</li>
</country>
<region>
<li>Galice</li>
<li>La Rioja</li>
</region>
</list>
<tree>
<country name="Espagne">
<region name="La Rioja">
<name sortKey="Berlanas, Carmen" sort="Berlanas, Carmen" uniqKey="Berlanas C" first="Carmen" last="Berlanas">Carmen Berlanas</name>
</region>
<name sortKey="Andres Sodupe, Marcos" sort="Andres Sodupe, Marcos" uniqKey="Andres Sodupe M" first="Marcos" last="Andrés-Sodupe">Marcos Andrés-Sodupe</name>
<name sortKey="Bujanda, Rebeca" sort="Bujanda, Rebeca" uniqKey="Bujanda R" first="Rebeca" last="Bujanda">Rebeca Bujanda</name>
<name sortKey="Del Pilar Martinez Diz, Maria" sort="Del Pilar Martinez Diz, Maria" uniqKey="Del Pilar Martinez Diz M" first="María" last="Del Pilar Martínez-Diz">María Del Pilar Martínez-Diz</name>
<name sortKey="Del Pilar Martinez Diz, Maria" sort="Del Pilar Martinez Diz, Maria" uniqKey="Del Pilar Martinez Diz M" first="María" last="Del Pilar Martínez-Diz">María Del Pilar Martínez-Diz</name>
<name sortKey="Diaz Losada, Emilia" sort="Diaz Losada, Emilia" uniqKey="Diaz Losada E" first="Emilia" last="Díaz-Losada">Emilia Díaz-Losada</name>
<name sortKey="Gramaje, David" sort="Gramaje, David" uniqKey="Gramaje D" first="David" last="Gramaje">David Gramaje</name>
<name sortKey="L Pez Manzanares, Beatriz" sort="L Pez Manzanares, Beatriz" uniqKey="L Pez Manzanares B" first="Beatriz" last="L Pez-Manzanares">Beatriz L Pez-Manzanares</name>
<name sortKey="Ojeda, Sonia" sort="Ojeda, Sonia" uniqKey="Ojeda S" first="Sonia" last="Ojeda">Sonia Ojeda</name>
</country>
</tree>
</affiliations>
</record>

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